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Workbench Timeout but Query still running on server (no replies)

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We have a MySQL 5.7 environment and we had an issue recently where someone ran a large Select statement from Workbench, they got a timeout message from Workbench but the query was still running on the server side 19 hours later which resulted in blocks of a subsequent table name switch and then other application selects coming in after that. Is the expected behaviour that the query may timeout in Workbench but still be running on the MySQL server?

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